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Here is a quick list of differences between our two products.

Ability tasks from multiple projects in a single Gantt viewWhere is Gantt Specific data  persisted?
FeatureCrystal GanttCrystal Gantt Pro
Allows you to visualize No. Only tasks from a specific project can be Tasks within a single Project in the Gantt View.Yes. By allowing Allows you to first define a Program
Support for JQL Filters to select which tasks you want in your ViewN/AYes.
visualize Tasks across multiple Projects in the Gantt, by first defining a Program. Optionally use JQL filters to select tasks that make up a Program.
Gantt specific data (Start/End date, Progress, Sort Order, Indent Level) Within your projects in JIRAIn the Cloudgets persisted in custom fields that need to be added to your Projects.Gantt Specific data gets persisted in a database outside JIRA, so no need for adding custom fields.